Dear Vitaliy, thank you for your answer. That is the result I want to obtain. But, How to use it with spheres, cylinders or other 3d shapes instead of a ball?
What actually I want to do is to show a region of a crystal composed by hexagonal prisms elements but the boundaries are appearing transparent. I would like to show faces with the color of the shape. If you run the code, you will see two graphs at the end. The last one is the central region of the structure but it is not closed or solid.
You can construct any region you need, read up the docs I referenced in my 1st post. There are many many ways to do this. Generally see ImplicitRegion for custom regions. There is also data. For example some SolidData: