When opened in the newest version 11.1.1, you see that the two text are, actually, typeset in different fonts:

One is clearly sans-serif, and one if serif. (arial, and times from the looks of it, i'm not sure...)
They might look the same on your system if you miss certain fonts or if they are not found...
If you select all the text and convert it to a single font, and then re-export, does that work?