Short URL to share this post: https://wolfr.am/coronavirus
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This post is intended to be the hub for Wolfram resources related to novel coronavirus disease COVID-19 that originated in Wuhan, China. The larger aim is to provide a forum for disseminating ways in which Wolfram technologies and coding can be utilized to shed light on the virus and pandemic. Possibilities include using the Wolfram Language for data-mining, modeling, analysis, visualizations, and so forth. Among other things, we encourage comments and feedback on these resources. Please note that this is intended for technical analysis and discussion supported by computation. Aspects outside this scope and better suited for different forums should be avoided. Thank you for your contribution!
Short URL to share dashboard: https://wolfr.am/COVID19Dashboard
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FEATURED CONTENT
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More pandemic-related information and data sets emerging every day. We invite people in the community to contribute to making more data surrounding this topic computable. Here is a call to action with some recommendations for people who want to do more, whether it's just pointing out relevant data sources, or taking the time to make some of that data computable and more instantly ready for other people to explore: https://wolfr.am/COVID-19-DATA .
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FOLLOW THIS LINK to see all available COVID-19 data repositories ready for computation in the Wolfram Language .
Changes in Updates to SARS-CoV-2 Sequences in the Wolfram Data Repository
We have published and are continuously updating the Wolfram Data Repository entries. Below are a few key ones. Follow the link above to browse all repositories. We encourage you to make your own contributions of curated data relevant to COVID-19.
Pandemic Data for Novel Coronavirus COVID-19
https://www.wolframcloud.com/obj/resourcesystem/published/DataRepository/resources/Epidemic-Data-for-Novel-Coronavirus-COVID-19
Genetic Sequences for the SARS-CoV-2 Coronavirus
https://datarepository.wolframcloud.com/resources/Genetic-Sequences-for-the-SARS-CoV-2-Coronavirus
Patient Medical Data for Novel Coronavirus COVID-19
https://datarepository.wolframcloud.com/resources/Patient-Medical-Data-for-Novel-Coronavirus-COVID-19
COVID-19 Hospital Resource Use Projections
https://datarepository.wolframcloud.com/resources/COVID-19-Hospital-Resource-Use-Projections
OECD Data: Hospital Beds Per Country
https://datarepository.wolframcloud.com/resources/OECD-Data-Hospital-Beds-Per-Country
Hospital Beds Per US State
https://datarepository.wolframcloud.com/resources/Hospital-Beds-Per-US-State
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We encourage you to share your computational explorations relevant to coronavirus on Wolfram Community as stand-alone articles and then comment with their URL links on this discussion thread. We will summarize these articles in the following list:
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FEATURED
COVID-19 Livestream Notebook March 24 by Stephen Wolfram
https://www.wolframcloud.com/obj/s.wolfram/Published/COVID-19-Livestream-March-24.nb
Agent-Based Networks Models for COVID-19 by Christopher Wolfram
https://community.wolfram.com/groups/-/m/t/1907703
Epidemiological Models for Influenza and COVID-19 by Robert Nachbar
https://community.wolfram.com/groups/-/m/t/1896178
Epidemic simulation with a polygon container by Francisco Rodríguez
https://community.wolfram.com/groups/-/m/t/1901002
Distance to nearest confirmed US COVID-19 case by Chip Hurst
https://community.wolfram.com/groups/-/m/t/1911583
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EPIDEMIC MODELING: SIMULATION
Epidemic simulation with a polygon container by Francisco Rodríguez
https://community.wolfram.com/groups/-/m/t/1901002
Agent based epidemic simulation by Jon McLoone
https://community.wolfram.com/groups/-/m/t/1900481
Modeling the spatial spread of infection diseases in the US by Diego Zviovich
https://community.wolfram.com/groups/-/m/t/1889072
Geo-spatial-temporal COVID-19 simulations and visualizations over USA by Diego Zviovich
https://community.wolfram.com/groups/-/m/t/1900514
Life, Liberty, and Lockdowns: cellular automaton approach by Philip Maymin
https://community.wolfram.com/groups/-/m/t/2181433
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EPIDEMIC MODELING: COMPARTMENTAL
Stochastic Epidemiology Models with Applications to the COVID-19 by Robert Nachbar
https://community.wolfram.com/groups/-/m/t/1980051
COVID19: Italian SIRD estimates and prediction by Christos Papahristodoulou
https://community.wolfram.com/groups/-/m/t/1984320
Solver for COVID-19 epidemic model with the Caputo fractional derivatives by Alexander Trounev
https://community.wolfram.com/groups/-/m/t/1976589
Epidemiological Model for repetitive rapid testing for COVID-19 by Diego Zviovich
https://community.wolfram.com/groups/-/m/t/2075883
Phase transition of a SIR agent-based models by Diego Zviovich
https://community.wolfram.com/groups/-/m/t/1977230
A simple estimate of covid-19 fatalities based on past data by Kay Herbert
https://community.wolfram.com/groups/-/m/t/1959438
SIR Model with Log-normal infected periods by Diego Zviovich
https://community.wolfram.com/groups/-/m/t/1946292
SEI2HR-Econ model with quarantine and supplies scenarios by Anton Antonov
https://community.wolfram.com/groups/-/m/t/1937880
COVID-19 - Policy Simulator - Can you find the perfect policy? by Jan Brugard
https://community.wolfram.com/groups/-/m/t/1931352
Epidemiological Models for Influenza and COVID-19 by Robert Nachbar
https://community.wolfram.com/groups/-/m/t/1896178
Exploring Epidemiological Modeling by Jordan Hasler
https://community.wolfram.com/groups/-/m/t/1920119
SEI2HR model with quarantine scenarios by Anton Antonov
https://community.wolfram.com/groups/-/m/t/1926505
The SIR Model for Spread of Disease by Arnoud Buzing
https://community.wolfram.com/groups/-/m/t/1903289
COVID-19 - R0 and Herd Immunity - are we getting closer? by Jan Brugard
https://community.wolfram.com/groups/-/m/t/1911422
Basic experiments workflow for simple epidemiological models by Anton Antonov
https://community.wolfram.com/groups/-/m/t/1895675
Scaling of epidemiology models with multi-site compartments by Anton Antonov
https://community.wolfram.com/groups/-/m/t/1897377
WirVsVirus 2020 hackathon participation by Anton Antonov
https://community.wolfram.com/groups/-/m/t/1907256
An SEIR like model that fits the coronavirus infection data by Enrique Garcia Moreno
https://community.wolfram.com/groups/-/m/t/1888335
A SEIRD Model For COVID-19 Using DDEs by Luis Borgonovo
https://community.wolfram.com/groups/-/m/t/1996374
A Neat Package for Compartmental Model Diagrams by Hamza Alsamraee
https://community.wolfram.com/groups/-/m/t/2078640
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EPIDEMIC MODELING: LOGISTIC
COVID-19 pandemic data in Italy by Riccardo Fantoni
https://community.wolfram.com/groups/-/m/t/1909687
Predicting Coronavirus Epidemic in United States by Robert Rimmer
https://community.wolfram.com/groups/-/m/t/1906954
Tracking Coronavirus Testing in the United States by Robert Rimmer
https://community.wolfram.com/groups/-/m/t/1902302
Logistic Model for Quarantine Controlled Epidemics by Robert Rimmer
https://community.wolfram.com/groups/-/m/t/1900530
Updated: coronavirus logistic growth model: China by Robert Rimmer
https://community.wolfram.com/groups/-/m/t/1890271
Coronavirus logistic growth model: China by Robert Rimmer
https://community.wolfram.com/groups/-/m/t/1887435
Coronavirus logistic growth model: Italy and South Korea by Robert Rimmer
https://community.wolfram.com/groups/-/m/t/1887823
Coronavirus logistic growth model: South Korea by Robert Rimmer
https://community.wolfram.com/groups/-/m/t/1894561
Logistic growth model for epidemic Covid-19 in Colombia by Diego Ramos
https://community.wolfram.com/groups/-/m/t/2092786
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GENOMICS
Analyzing the spread of SARS-CoV-2 variants in California by Daniel Lichtblau
https://community.wolfram.com/groups/-/m/t/2205357
Analyzing the spread of SARS-CoV-2 variants in Florida by Daniel Lichtblau
https://community.wolfram.com/groups/-/m/t/2206874
Analyzing Nextstrain Data with WFR Newick Functions (COVID-19/SARS-CoV-2) by John Cassel
https://community.wolfram.com/groups/-/m/t/1958952
Finding and analyzing a COVID subvariant in Australia by Daniel Lichtblau
https://community.wolfram.com/groups/-/m/t/2342489
Analyzing SARS-CoV-2 Genetic Sequences by John Cassel & Daniel Lichtblau
https://blog.wolfram.com/2021/08/19/newick-trees-proximity-resources-and-accessions-analyzing-sars-cov-2-genetic-sequences/
Estimating the number of times the SARS CoV-2 virus has replicated by Carlos Munoz
https://community.wolfram.com/groups/-/m/t/1943243
From sequenced SARS-CoV-2 genomes to a phylogenetic tree by Daniel Lichtblau
https://community.wolfram.com/groups/-/m/t/1961461
Genome analysis and the SARS-nCoV-2 by Daniel Lichtblau
https://community.wolfram.com/groups/-/m/t/1874816
Visualizing Sequence Alignments from the COVID-19 by Jessica Shi
https://community.wolfram.com/groups/-/m/t/1875352
A walk-through of the SARS-CoV-2 nucleotide Wolfram resource by John Cassel
https://community.wolfram.com/groups/-/m/t/1887456
Geometrical analysis of genome for COVID-19 vs SARS-like viruses by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1878824
Chaos Game For Clustering of Novel Coronavirus COVID-19 by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1875994
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DATA ANALYSIS
Deep neural network detection & clinical staging of COVID-19 chest X-rays by Peter Riley
https://community.wolfram.com/groups/-/m/t/2389110
COVID-19 - The Swedish Experiment - Is it working? by Jan Brugard
https://community.wolfram.com/groups/-/m/t/1974412
A simple COVID-19 spread model by Daniel Lichtblau
https://community.wolfram.com/groups/-/m/t/1945196
COVID19: The performance of the Swedish strategy by Christos Papahristodoulou
https://community.wolfram.com/groups/-/m/t/1990972
Exploring social trends on Covid-19 pandemic using WikipediaData by Jofre Espigule-Pons
https://community.wolfram.com/groups/-/m/t/1931508
Google Mobility Data by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1946686
Understanding Aggregate COVID Curves by Christopher Wolfram
https://community.wolfram.com/groups/-/m/t/2068457
Apple mobility trends data visualization by Anton Antonov
https://community.wolfram.com/groups/-/m/t/1942813
Computing COVID-19 Spread Rates in US Cities by Daniel Lichtblau
https://community.wolfram.com/groups/-/m/t/1930261
COVID-19 data and the Newcomb Benford Distribution by Gustavo Delfino
https://community.wolfram.com/groups/-/m/t/1913908
Short-time trends for COVID-19, by Fabian Wenger
https://community.wolfram.com/groups/-/m/t/1912710
What countries are hit hard by COVID19 outbreak? by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1904507
COVID19 in Iran: under-diagnosis issue by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1891140
Coronavirus analysis: descriptive statistics with SQL functions by Damian Calin
https://community.wolfram.com/groups/-/m/t/2206078
Covid-19 vaccine campaigns efficacy analysis by Damian Calin
https://community.wolfram.com/groups/-/m/t/2383314
Argentina: COVID-19 Data Analysis by Tobias Canavesi
https://community.wolfram.com/groups/-/m/t/1932910
Analysis of the Change in Phillips Curve After COVID-19 with Regression by Seojin Yoon
https://community.wolfram.com/groups/-/m/t/2055704
COVID wave alert: statistical analysis and visualization by Antonio Neves
https://community.wolfram.com/groups/-/m/t/2115658
Predicting COVID-19 using cough sounds classification by Siria Sadeddin
https://community.wolfram.com/groups/-/m/t/2166833
Covid-19 vaccination data analysis using SQL functions by Damian Calin
https://community.wolfram.com/groups/-/m/t/2324474
Analyzing COVID-19 vaccine sentiment over time by Arshaan Sayed
https://community.wolfram.com/groups/-/m/t/2317293
VAERS data analysis using SQL functions by Damian Calin
https://community.wolfram.com/groups/-/m/t/2351726
Correlating COVID-19 government measures to biweekly/daily outbreaks by Arshaan Sayed
https://community.wolfram.com/groups/-/m/t/2362327
Plotting Covid19 sentiment in different regions of Chennai by Aditya Sairam Prakash
https://community.wolfram.com/groups/-/m/t/2388236
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DATA VISUALIZATIONS
CDC COVID19 vaccination data across US counties by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/2282418
Top 20 COVID countries HeatMap by absolute death and death in ppm by Rodrigo Murta
https://community.wolfram.com/groups/-/m/t/2004800
US Counties COVID-19 confirmed cases by population density timelines by Bob Sandheinrich
https://community.wolfram.com/groups/-/m/t/1992898
3D Modeling of the SARS-CoV-2 Virus in the Wolfram Language by Jeff Bryant
https://community.wolfram.com/groups/-/m/t/1989540
California COVID19 Data by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/2132204
COVID-19 progress in Peru macro regions: coast vs mountain vs jungle by Francisco Rodríguez
https://community.wolfram.com/groups/-/m/t/1965079
COVID-19 reopening criterion: a simple visualization by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1962615
100 Days of COVID19 Over US Counties by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1956368
Population Density Map by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1955760
Google Mobility Data by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1946686
COVID19 Case-Fatality Ratio, Income, and Age: Simple Visualization by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1939045
Data Analysis of Coronavirus in Mexico by Ivan Martinez
https://community.wolfram.com/groups/-/m/t/1927657
Confirmed COVID-19 Cases in Catalonia by Bernat Espigulé Pons
https://community.wolfram.com/groups/-/m/t/1919468
Distance to nearest confirmed US COVID-19 case by Chip Hurst
https://community.wolfram.com/groups/-/m/t/1911583
COVID19 Confirmed Cases: US Counties by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/1950980
COVID19 data visualization across US counties by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/2119049
Maps for Visualizing Covid-19's Effect by Eric Mockensturm
https://community.wolfram.com/groups/-/m/t/1934457
US Counties COVID-19 deaths plot by Bob Sandheinrich
https://community.wolfram.com/groups/-/m/t/1918332
Comparing the spread of COVID-19 between countries, Jan Brugard
https://community.wolfram.com/groups/-/m/t/1905992
NY Times COVID-19 data visualization by Anton Antonov
https://community.wolfram.com/groups/-/m/t/1911668
COVID-19 cases for each administrative division in Spain by Bernat Espigulé Pons
https://community.wolfram.com/groups/-/m/t/1910116
Propagation risk of COVID-19 by local contact in Spain (10 - 14 March) by Bernat Espigulé Pons
https://community.wolfram.com/groups/-/m/t/1898126
Visualizing the Pandemic Data COVID-19 by Martijn Froeling
https://community.wolfram.com/groups/-/m/t/1899870
COVID-19 visualization of turning point by Isao Maruyama
https://community.wolfram.com/groups/-/m/t/1899911
Mapping "Live" COVID Data on a Globe by Gabriel Lemieux
https://community.wolfram.com/groups/-/m/t/1902102
Novel Coronavirus COVID-19 in Brazil by Estevao Teixeira
https://community.wolfram.com/groups/-/m/t/1905950
Mapping Novel Coronavirus COVID-19 Outbreak by Jofre Espigule-Pons
https://community.wolfram.com/groups/-/m/t/1868945
Ways to visualize COVID-19 simulation results? by Kyle Keane
https://community.wolfram.com/groups/-/m/t/1962739
General and COVID-19 deaths in Sweden by Oscar Rodriguez
https://community.wolfram.com/groups/-/m/t/2006377
COVID19 Tokyo per days of the week Isao Maruyama
https://community.wolfram.com/groups/-/m/t/2133807
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DATA PROCESSING
Cov-Tell: Daily COVID-19 Updates with Alexa (made with Wolfram APIFunction) by Jessica Shi
https://community.wolfram.com/groups/-/m/t/1958307
Build a COVID-19 Chest X-Ray Image Uploader with Cloud & Data Drop by Jofre Espigule-Pons
https://community.wolfram.com/groups/-/m/t/1919770
Scraping OpenTable's "State of the Industry" page by Aaron Enright
https://community.wolfram.com/groups/-/m/t/1911043
City-level Search Tool for Coronavirus (COVID-19) Confirmed Cases by David Lomiashvili
https://community.wolfram.com/groups/-/m/t/1913247
Web Scraper: New York Times Coronavirus Data by Robert Rimmer
https://community.wolfram.com/groups/-/m/t/1894426
TraCOV: Personalized COVID-19 Risk Analysis Tool by Jessica Shi
https://community.wolfram.com/groups/-/m/t/1977700
Mobility changes data: transforming to Wolfram Language dataset by Mads Bahrami
https://community.wolfram.com/groups/-/m/t/2160386
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MASKS
Effect of mandatory mask usage in COVID cases by Diego Zviovich
https://community.wolfram.com/groups/-/m/t/1919060
Face mask detection: classifying image data by Siria Sadeddin
https://community.wolfram.com/groups/-/m/t/2139499
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Other useful resources